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    Location: OneEye/exp/histogram.py - annotation
        
            
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    more work on stone detection
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import sys
import random
import cv2 as cv
import numpy as np
import scipy.cluster
import scipy.ndimage
from matplotlib import pyplot as plt
import PIL.Image
from PIL.ImageDraw import ImageDraw
from annotations import DataFile,computeBoundingBox
from hough import show,houghLines
def createHistogram(img):
	# Convert BGR to HSV
	hsv = cv.cvtColor(img, cv.COLOR_BGR2HSV)
	# H in range(0,180)
	# S in range(0,256)
	# V in range(0,256)
	planes=cv.split(hsv)
	hhist=cv.calcHist(planes,[0],None,[256],(0,180),accumulate=False)
	shist=cv.calcHist(planes,[1],None,[256],(0,256),accumulate=False)
	vhist=cv.calcHist(planes,[2],None,[256],(0,256),accumulate=False)
	width=512
	height=400
	binSize=width//256
	histImage = np.zeros((height, width, 3), dtype=np.uint8)
	cv.normalize(hhist, hhist, alpha=0, beta=height, norm_type=cv.NORM_MINMAX)
	cv.normalize(shist, shist, alpha=0, beta=height, norm_type=cv.NORM_MINMAX)
	cv.normalize(vhist, vhist, alpha=0, beta=height, norm_type=cv.NORM_MINMAX)
	for i in range(1, 256):
		cv.line(histImage, ( binSize*(i-1), height - int(round(hhist[i-1][0])) ),
						( binSize*(i), height - int(round(hhist[i][0])) ),
						( 255, 0, 0), thickness=2)
		cv.line(histImage, ( binSize*(i-1), height - int(round(shist[i-1][0])) ),
						( binSize*(i), height - int(round(shist[i][0])) ),
						( 0, 255, 0), thickness=2)
		cv.line(histImage, ( binSize*(i-1), height - int(round(vhist[i-1][0])) ),
						( binSize*(i), height - int(round(vhist[i][0])) ),
						( 0, 0, 255), thickness=2)
	cv.imshow('Source image', img)
	cv.imshow('calcHist Demo', histImage)
	cv.waitKey()
def quantize(img):
	arr=np.reshape(img,(-1,3)).astype(np.float)
	colors=np.array([[0,0,0],[255,255,255],[193,165,116]],np.float)
	print(colors)
	(centers,distortion)=scipy.cluster.vq.kmeans(arr,colors)
	print("k-means centers:",centers)
	return centers
def computeClosest(x,centers):
	res=centers[0]
	d=np.linalg.norm(res-x)
	for c in centers:
		d_=np.linalg.norm(c-x)
		if d_<d:
			res=c
			d=d_
	return res
def score(arr1,arr2):
	try:
		return (arr1&arr2).sum() / ((arr1|arr2).sum() or 1)
	except TypeError:
		print(type(arr1),type(arr2))
		print(arr1.shape,arr2.shape)
		print(arr1.dtype,arr2.dtype)
		raise TypeError()
def maxOp55(arr):
	m=arr.max()
	return 1 if m>127 and arr[2,2]==m else 0
def ellipse(a,b):
	img=PIL.Image.new("1",(a,b))
	d=ImageDraw(img)
	d.ellipse((1,1,a-1,b-1),fill=1)
	img.save("/tmp/ellipse.png")
	return np.array(img,dtype=np.uint8)
def detectStones(img):
	(bh,bw)=img.shape
	sw=bw//19
	sh=bh//19
	print(img.shape,(sw,sh))
	ell=ellipse(sw,sh)*255
	# print(ell)
	hitMap=np.zeros_like(img,dtype=np.uint8)
	for i in range(sw,bw):
		for j in range(sh,bh):
			region=stones[j-sh:j, i-sw:i]
			hitMap[j,i]=255*score(region,ell)
	show(hitMap)
	return hitMap
def detectGrid(img):
	(bh,bw)=img.shape
	gridMap=np.zeros_like(img,dtype=np.uint8)
	for i in range(5,bw):
		for j in range(5,bh):
			region=img[j-5:j, i-5:i]
			gridMap[j,i]=255*maxOp55(region)
	show(gridMap)
def locateStone(img):
	(bh,bw)=img.shape
	sw=bw//19
	sh=bh//19
	print(img.shape,(sw,sh))
	ell=ellipse(sw,sh)*255
	# print(ell)
	y=random.randrange(sh,bh)
	x=random.randrange(sw,bw)
	region=stones[y-sh:y, x-sw:x]
	sc=score(region,ell)
	print(sc)
	show(region)
	return sc
def locateLocalMaximum(img):
	(bh,bw)=img.shape
	x=random.randrange(0,bw)
	y=random.randrange(0,bh)
	val=img[y,x]
	img_=cv.cvtColor(img,cv.COLOR_GRAY2BGR)
	while True:
		for (dx,dy) in [(0,1),(1,0),(0,-1),(-1,0),(1,1),(-1,1),(1,-1),(-1,-1)]:
			x_=x+dx
			y_=y+dy
			val_=img[y_,x_] if 0<=x_<bw and 0<=y_<bh else 0
			if val_>val:
				x=x_
				y=y_
				val=val_
				img_.itemset((y,x,0),255)
				continue
		break
	print(x,y,val)
	img_.itemset((y,x,2),255)
	show(img_)
	return (x,y,val)
if __name__=="__main__":
	filepath=sys.argv[1]
	annotations=DataFile(sys.argv[2])
	filename=os.path.basename(filepath)
	(x1,y1,x2,y2)=computeBoundingBox(annotations[filename][0])
	(w,h)=(x2-x1,y2-y1)
	img=cv.imread(filepath)
	(x3,x4,y3,y4)=(x1+w//4,x1+3*w//4,y1+h//4,y1+3*h//4)
	print("x3,x4,y3,y4:",x3,x4,y3,y4)
	rect=img[y3:y4,x3:x4,:]
	centers=quantize(rect)
	print("x1,x2,y1,y2:",(x1,x2,y1,y2))
	data=np.reshape(img[y1:y2,x1:x2,:],(-1,3))
	print("data.shape:",data.shape)
	(keys,dists)=scipy.cluster.vq.vq(data,centers)
	print("keys.shape:",keys.shape)
	pixels=np.array([centers[k] for k in keys],dtype=np.uint8).reshape((y2-y1,x2-x1,3))
	img[y1:y2,x1:x2,:]=pixels
	print("image quantized")
	rect=img[y1:y2,x1:x2]
	maskB=cv.inRange(rect,np.array([0,0,0]),np.array([80,80,80]))
	maskB=cv.erode(maskB,np.ones((3,3),np.uint8),iterations=2)
	maskW=cv.inRange(rect,np.array([160,160,160]),np.array([256,256,256]))
	maskW=cv.erode(maskW,np.ones((3,3),np.uint8),iterations=2)
	show(img,filename)
	show(maskB,filename)
	show(maskW,filename)
	stones=cv.bitwise_or(maskB,maskW)
	# houghLines(stones)
	show(stones)
	(contours,hierarchy)=cv.findContours(stones,cv.RETR_LIST,cv.CHAIN_APPROX_SIMPLE)
	contourImg=cv.drawContours(cv.cvtColor(stones,cv.COLOR_GRAY2BGR), contours, -1, (0,255,0), 1)
	for (i,c) in enumerate(contours):
		print(i)
		moments=cv.moments(c)
		center=(moments["m10"]/(moments["m00"] or 1), moments["m01"]/(moments["m00"] or 1))
		print("center:", center)
		cv.circle(contourImg,tuple(map(int,center)),3,(255,255,0))
		area=cv.contourArea(c)
		print("area:",area)
		(x,y,w,h)=cv.boundingRect(c)
		print("bounding box:",(x,y,w,h))
		print("coverage1:",area/(w*h or 1))
		hull=cv.convexHull(c)
		print("coverage2:",area/(cv.contourArea(hull) or 1))
		print()
	show(contourImg)
	# for i in range(10):
	# 	locateStone(stones)
	# distMap=cv.distanceTransform(stones,cv.DIST_L2,5)
	# print("dist map:")
	# show(distMap)
	# print("hit map:")
	# hitMap=detectStones(stones)
	# for i in range(10):
	# 	locateLocalMaximum(hitMap)
# dlib.find_peaks
# ministones=cv.resize(stones,None,fx=0.25,fy=0.25,interpolation=cv.INTER_AREA)
# dft = cv.dft(np.float32(ministones),flags = cv.DFT_COMPLEX_OUTPUT)
# dft_shift = np.fft.fftshift(dft)
# magnitude_spectrum = 20*np.log(cv.magnitude(dft_shift[:,:,0],dft_shift[:,:,1]))
# plt.subplot(121),plt.imshow(stones, cmap = 'gray')
# plt.title('Input Image'), plt.xticks([]), plt.yticks([])
# plt.subplot(122),plt.imshow(magnitude_spectrum, cmap = 'gray')
# plt.title('Magnitude Spectrum'), plt.xticks([]), plt.yticks([])
# plt.show()
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